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Published online
doi:10.1083/jcb.200801001
The Journal of Cell Biology, Vol. 182, No. 6, 1141-1151
The Rockefeller University Press, 0021-9525 $30.00
© Brett et al.
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Article

Efficient termination of vacuolar Rab GTPase signaling requires coordinated action by a GAP and a protein kinase



Christopher L. Brett1, Rachael L. Plemel1, Braden T. Lobinger1, Marissa Vignali2, Stanley Fields2,3, and Alexey J. Merz1

1 Department of Biochemistry, 2 Department of Genome Sciences, and 3 Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195

Correspondence to Alex Merz: merza{at}u.washington.edu

Rab guanosine triphosphatases (GTPases) are pivotal regulators of membrane identity and dynamics, but the in vivo pathways that control Rab signaling are poorly defined. Here, we show that the GTPase-activating protein Gyp7 inactivates the yeast vacuole Rab Ypt7 in vivo. To efficiently terminate Ypt7 signaling, Gyp7 requires downstream assistance from an inhibitory casein kinase I, Yck3. Yck3 mediates phosphorylation of at least two Ypt7 signaling targets: a tether, the Vps-C/homotypic fusion and vacuole protein sorting (HOPS) subunit Vps41, and a SNARE, Vam3. Phosphorylation of both substrates is opposed by Ypt7-guanosine triphosphate (GTP). We further demonstrate that Ypt7 binds not one but two Vps-C/HOPS subunits: Vps39, a putative Ypt7 nucleotide exchange factor, and Vps41. Gyp7-stimulated GTP hydrolysis on Ypt7 therefore appears to trigger both passive termination of Ypt7 signaling and active kinase-mediated inhibition of Ypt7's downstream targets. We propose that signal propagation through the Ypt7 pathway is controlled by integrated feedback and feed-forward loops. In this model, Yck3 enforces a requirement for the activated Rab in docking and fusion.

Abbreviations used in this paper: CIP, calf intestinal phosphatase; GAP, GTPase-activating protein; GEF, guanine nucleotide exchange factor; HOPS, homotypic fusion and vacuole protein sorting; rGdi1, recombinant GDI1; SC, synthetic complete; TBC, Tre-2/Bub2/Cdc16.

© 2008 Brett et al. This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.jcb.org/misc/terms.shtml). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 3.0 Unported license, as described at http://creativecommons.org/licenses/by-nc-sa/3.0/).


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