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© The Rockefeller University Press,
0021-9525/2000//589 $5.00
The Journal of Cell Biology, Volume 150, Number 3,
, 2000 589-600
Original Article |
Mutations in Synaptojanin Disrupt Synaptic Vesicle Recycling
jorgensen{at}biology.utah.edu
Synaptojanin is a polyphosphoinositide phosphatase that is found at synapses and binds to proteins implicated in endocytosis. For these reasons, it has been proposed that synaptojanin is involved in the recycling of synaptic vesicles. Here, we demonstrate that the unc-26 gene encodes the Caenorhabditis elegans ortholog of synaptojanin. unc-26 mutants exhibit defects in vesicle trafficking in several tissues, but most defects are found at synaptic termini. Specifically, we observed defects in the budding of synaptic vesicles from the plasma membrane, in the uncoating of vesicles after fission, in the recovery of vesicles from endosomes, and in the tethering of vesicles to the cytoskeleton. Thus, these results confirm studies of the mouse synaptojanin 1 mutants, which exhibit defects in the uncoating of synaptic vesicles (Cremona, O., G. Di Paolo, M.R. Wenk, A. Luthi, W.T. Kim, K. Takei, L. Daniell, Y. Nemoto, S.B. Shears, R.A. Flavell, D.A. McCormick, and P. De Camilli. 1999. Cell. 99:179–188), and further demonstrate that synaptojanin facilitates multiple steps of synaptic vesicle recycling.
Key Words: Caenorhabditis elegans synaptic transmission endocytosis unc-26 polyphosphoinositide phosphatase
© 2000 The Rockefeller University Press
| Introduction |
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Synaptic vesicle recovery from the plasma membrane can be divided into four steps: clathrin coat assembly, budding, fission, and uncoating (Cremona and De Camilli 1997). During the initial step, synaptic vesicle proteins are assembled together in the plasma membrane and marked for recycling (Miller and Heuser 1984; Jorgensen et al. 1995; Nonet et al. 1999). The process is likely to be mediated by the clathrin adaptor complex, which subsequently recruits clathrin to the area of membrane to be recycled. In the budding step, clathrin assembles into a curved array and the membrane invaginates. In the fission step, dynamin monomers assemble into a collar around the neck of the vesicle and sever the vesicle from the plasma membrane. In the uncoating step, the clathrin and clathrin adaptor protein coat is disassembled. Vesicle uncoating must occur before vesicles can fuse to other membranes.
The phosphoinositide (PI) phosphatase synaptojanin has been proposed to function within the synaptic vesicle recycling pathway. Synaptojanin is defined by three domains (McPherson et al. 1994, McPherson et al. 1996): a polyphosphoinositide phosphatase domain similar to the yeast Sac1 protein (Chung et al. 1997; Guo et al. 1999), a PI 5–phosphatase domain, and a proline-rich domain. Three attributes of synaptojanin suggest a role in synaptic vesicle recycling: its location, its protein interactions, and its lipid substrate specificity.
First, the location of synaptojanin is consistent with a role for the protein in the endocytosis of synaptic vesicles. Synaptojanin is highly enriched in the brain and is located at nerve terminals, and it is associated with synaptic vesicles and coated endocytic intermediates (McPherson et al. 1994; Haffner et al. 1997). Moreover, the distribution of synaptojanin is coincident with that of other endocytic proteins, such as amphiphysin and dynamin (McPherson et al. 1994, McPherson et al. 1996).
Second, synaptojanin binds a complex of proteins implicated in endocytosis. Synaptojanin binds to amphiphysin and endophilin directly (McPherson et al. 1996; Micheva et al. 1997). Amphiphysin also binds to both the GTPase dynamin and the
subunit of the AP2 clathrin adaptor complex (David et al. 1996; Grabs et al. 1997). Moreover, synaptojanin, dynamin, and amphiphysin can be isolated in a complex with the clathrin adaptor AP2. A similar complex can be isolated lacking amphiphysin, but including endophilin (Micheva et al. 1997; Slepnev et al. 1998). Injection of the SH3 domains of amphiphysin (into lamprey terminals) or of endophilin (into a reconstituted in vitro assay) blocks endocytosis via a dominant-negative disruption of protein interactions central to the complex (Shupliakov et al. 1997; Wigge et al. 1997; Simpson et al. 1999), illustrating the importance of these complexes in synaptic vesicle recycling.
Third, proteins implicated in endocytosis have been shown to bind to the lipid substrates of synaptojanin. Synaptojanin is a polyphosphoinositide phosphatase, capable of selectively cleaving the 3-, 4-, and 5-phosphates from PI(3)P, PI(4)P, PI(3,5)P2, PI(4,5)P2, and PI(3,4,5)P3 (McPherson et al. 1996; Chung et al. 1997; Woscholski et al. 1997; Guo et al. 1999). The Sac1 domain of synaptojanin acts as a 3-, 4-, and 5-polyphosphoinositide phosphatase; at least in yeast, the PI 4-phosphatase activity of this domain appears to be the most prominent (Guo et al. 1999). The second phosphatase domain provides PI 5-phosphatase activity. These dual phosphatase domains, encoded within a single polypeptide chain, are reflected in the protein's namesake, Janus, the two-faced Roman god of gateways. Since a number of proteins of the core endocytic complex bind to PI(4,5)P2, including dynamin, synaptotagmin, AP2, and AP180, the phosphatase activity of synaptojanin may regulate the recruitment of endocytic proteins to the plasma membrane (De Camilli et al. 1996; Schiavo et al. 1996; Zheng et al. 1996; Hao et al. 1997; Jost et al. 1998; Gaidarov and Keen 1999).
The phenotype of synaptojanin 1 mutant mice supports a role for synaptojanin in the uncoating step of the recycling pathway (Cremona et al. 1999). Deletion mutations of the synaptojanin gene lead to 100% lethality within 15 d of birth. These animals exhibit an accumulation of clathrin-coated vesicles at nerve terminals in both the whole animal and in cultured cortical neurons. In vitro studies on protein-free liposomes derived from mutant or wild-type animals show increased formation of clathrin-coated structures in the mutant. These observations indicate a role for synaptojanin in the uncoating of vesicles, but do not reveal a role for PIs in earlier steps in the recycling pathway, such as clathrin recruitment or vesicle fission.
We cloned and characterized the synaptojanin ortholog of Caenorhabditis elegans, and showed that it is encoded by the unc-26 gene. unc-26 mutants exhibit a depletion of vesicles at synapses, an accumulation of endocytic pits, and an accumulation of coated vesicles. These defects are consistent with a role for synaptojanin at several steps in the endocytosis of synaptic vesicles. In addition, unc-26 mutants have cytoskeletal abnormalities and vesicle trafficking defects, suggesting broader roles for synaptojanin and PI lipids in maintenance of the cytoskeleton and in vesicle trafficking.
| Materials and Methods |
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Molecular Characterization of C. elegans Synaptojanin
A BLASTP Genbank database search using full-length rat synaptojanin revealed four C. elegans expressed sequence tags (ESTs): yk32c3, yk27c9, yk3c11, and yk16a11, belonging to the overlapping EST group CELK00306. Primers were designed against the sequence of the ESTs and used to amplify a 2-kb genomic region from wild-type DNA. This fragment was used to probe 70,000 plaques from a phage C. elegans genomic DNA library. We isolated three genomic clones that extended
5 kb past the end of cosmid JC8. A 10-kb HindIII fragment extending into the gap was subcloned from one of these clones, and the sequence of the nonoverlapping region was determined. None of these clones contained the complete 5' end of the open reading frame (ORF).
To obtain the 5' sequence of the gene, we first screened a cDNA library using the 2-kb genomic fragment. We isolated a single cDNA from this screen, UNC-26C. 5' splice leader rapid amplification of cDNA ends (RACE)-PCR enabled us to clone the remaining 5' end of the cDNA. Both SL1 and SL2 splice transcripts were isolated. The remaining 3' sequence was obtained by determining the restriction pattern of the initial four ESTs and then defining the sequence of the longest cDNA clone, yk32c3.
To demonstrate that unc-26 encodes Ce-synaptojanin, Southern blots of total worm genomic DNA from unc-26(n1307), and the revertant allele unc-26(n1308n1307) were probed with the initial 2-kb synaptojanin genomic fragment. This analysis revealed a restriction polymorphism in unc-26(n1307) that is restored to wild-type size in the revertant allele. The sequence of this region of unc-26(n1307) was sequenced and found to contain a tandem duplication of
650 bp within the first intron of the gene. We determined the sequence of 12 additional unc-26 alleles, using intragenic mapping as a guide for sequence determination (Charest et al. 1990). Approximately 20 homozygous mutant worms were placed in lysis buffer (50 mM KCl, 10 mM Tris, pH 8.2, 2.5 mM MgCl2, 0.45% NP-40, 0.45% Tween-20, 0.01% gelatin, 1 mg/mL proteinase K), incubated for 1 h at 65°C, followed by 15 min at 95°C. A series of primer sets were used to amplify the corresponding genomic region, and sequences of the PCR products were determined using the Thermosequenase cycle sequencing system (Amersham Pharmacia Biotech) or an ABI automated sequencer.
Mutant Analysis
Strength of Alleles.
unc-26 alleles were scored for their relative degree of mobility as larva and adults, growth rate, and overall body shape and size.
Nervous System Architecture.
unc-26(s1710) was crossed into strains containing integrated arrays expressing green fluorescent protein (GFP) under the control of the unc-47 promoter [EG1285: lin-15(n765ts) oxIs12(Punc-47:GFP)] or expressing synaptobrevin-GFP (SNB-GFP) under the control of the unc-25 promoter [MT8247: lin-15(n765ts) nIs52(Punc-25:SNB-GFP)]. The resulting strains were analyzed using confocal microscopy. Relative levels of synaptobrevin-GFP fluorescence at the cell body were determined in blind studies. 10 wild-type animals or 10 unc-26(s1710) animals were placed on a single microscope slide, and scored as wild-type or mutant based on cell body fluorescence. In 10 of 10 tests, all slides were scored correctly as either mutant or wild-type.
Ultrastructural Analysis.
BC3213 unc-22(s7) unc-26(s1710) dpy-4(e1166sd) was outcrossed against the wild type. Both arms of chromosome IV were outcrossed by removing flanking markers resulting in the strain EG1349 unc-26(s1710). EG1349 unc-26(s1710) was fixed for EM as previously described (Jorgensen et al. 1995). 433 ultrathin (
33 nm) serial sections were cut from four different worms. Images were recorded at 15,000-, 20,000-, or 25,000x. The ventral nerve cords were reconstructed from prints and the relevant structures were quantified in all sets. These data were compared with reconstructions of wild-type ventral nerve cords (328 sections) derived from two worms.
Vesicle Depletion.
The average number of synaptic vesicles per synapse was determined in the cholinergic neurons VA and VB, and in the
-aminobutyric acid (GABA) neuron VD. These neurons were identified by their dorsal/ventral positioning within the ventral nerve cord, and by their polarization: VA and VB neurons synapse on other neurons and muscle, whereas VD is directed solely to muscle (White et al. 1976). Synapses were defined to be any axon profile containing a morphologically defined electron-dense presynaptic specialization, including lateral sections until the number of synaptic vesicles in the profile dropped below the total average number of synaptic vesicles in all sections (wild-type = 9 synaptic vesicles; unc-26(s1710) = 5 synaptic vesicles), and no fewer than two lateral sections on each side.
Endocytic Pits and Coated Vesicles.
The presence of endocytic pits in VA, VB, and VD neurons was quantified. To avoid counting ripples in the membrane as endocytic pits, we scored invaginations as an endocytic pit only if they were present in a single section and did not continue into lateral sections. The distribution of these pits relative to active zones was quantified by measuring their distance to the nearest active zone in sections, where each section represents 33 nm. Pits found within sections containing an active zone were pooled into the <33-nm distance bin. The average number of pits at this distance was calculated by dividing the number of pits by the total number of sections at this distance. The average number of pits at any given distance in lateral sections was calculated by dividing the number of pits scored by twice the number of sections at that distance, to account for the double representation of each distance on either side of the synapse. Coated vesicles were scored and their distribution quantified using the same methodology as that outlined for endocytic structures.
Endosomal Compartments.
The presence of recognizable endosomal structures in VA, VB, and VD neurons was noted. An endosomal structure was defined as an amorphous vesicle >50 nm that extended two or more lateral sections.
| Results |
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We demonstrated that synaptojanin is encoded by the unc-26 gene by analyzing mutations of the locus. Because unc-26 genetically maps within a 0.67-map unit interval spanning the physical region containing Ce-synaptojanin (Fig. 1 A), it was a strong candidate gene for this ORF. We determined the sequences of the synaptojanin gene from 13 unc-26 alleles, and all 13 alleles contained mutations in this ORF (Table ). The linear order of the unc-26 mutations within the gene corresponds to their previously determined (Charest et al. 1990) intragenic map positions (Fig. 1 C), demonstrating that unc-26 encodes Ce-synaptojanin. Further proof is provided by an unstable allele; the duplication associated with the unc-26(n1307) allele is restored to both wild-type size on genomic Southern blots and wild-type sequence in the revertant allele unc-26(n1308n1307) (data not shown). The best candidate for a null allele is unc-26(s1710), a five-nucleotide deletion that results in a protein truncated within the NH2-terminal Sac1 domain.
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Although these abnormalities suggest a defect in synaptic function, they could also arise through defects in development of the nervous system. We examined the architecture of the GABA nervous system in unc-26 mutants using an unc-47-GFP reporter construct that expresses GFP in all 26 GABA neurons (McIntire et al. 1997). In the null allele unc-26(s1710), all 26 cell bodies were properly positioned and the axonal architecture appeared normal (wild-type, n = 4 animals; unc-26(s1710), n = 5 animals; data not shown). These results suggest that the nervous system develops normally, and that the locomotory defects are likely to be caused by aberrant function of the nervous system, possibly by defects in the endocytosis of synaptic vesicles.
Synaptic Vesicle Distribution Defects
To determine if there were defects in the recycling of synaptic vesicles in unc-26 mutants, we reconstructed serial electron micrographs of the ventral nerve cord of wild-type and unc-26(s1710) animals. unc-26(s1710) animals exhibited two defects in the distribution of synaptic vesicles at synapses. First, the total number of synaptic vesicles at synapses was depleted relative to the wild type. Second, the remaining vesicles exhibited linear arrangements and were dissociated from the active zone.
Qualitatively, unc-26 mutants exhibited a depletion of vesicles at synapses relative to the wild type (Fig. 3 A). Quantification of vesicles at synapses in the cholinergic and GABA-releasing motor neurons demonstrated that the number of vesicles per synapse in unc-26(s1710) animals (74 ± 4.8 vesicles/synapse, n = 85 synapses) was reduced to 38% of the number of synaptic vesicles in the wild type (194 ± 19.6 vesicles/synapse, n = 46 synapses; Fig. 3 B). This decrease suggested that unc-26 mutants are defective in synaptic vesicle endocytosis, or alternatively, in the transport of vesicles from the cell body (Jorgensen et al. 1995).
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Our ultrastructural analysis of neuromuscular junctions confirmed that unc-26 mutants are defective in synaptic vesicle recycling by revealing an accumulation of endocytic pits in the plasma membrane. These endocytic pits had faint collars at the neck of the budding vesicle; such collars are likely to be dynamin polymers, which are known to form rings visible by EM (Takei et al. 1995). The endocytic pits fell into two morphological classes: those coated by matrices resembling clathrin cages, and those lacking a coat (Fig. 5 A). The presence of two distinct types of endocytic pits suggests that multiple recycling pathways may exist at C. elegans neuromuscular junctions. Most of these pits were found within 100 nm of active zones (Fig. 5 B), and therefore, these structures are likely to be intermediates in the synaptic vesicle recycling pathway. Noncoated pits were often found immediately adjacent to active zones (Fig. 5 C). Such intermediate endocytic structures were not found at any synapses in the wild-type (wild-type, n = 328 sections; unc-26(s1710), n = 433 sections). The presence of these endocytic pits indicated a vesicle membrane recycling defect in unc-26 mutants, suggesting that the recycling pathway is slowed, allowing for the accumulation of short-lived endocytic intermediates. However, the number of these structures could not account for the depletion of mature vesicles at synapses. Thus, the loss of vesicles was likely to be due to delays at a previous step, such as in clathrin recruitment or vesicle budding.
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| Discussion |
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Our analysis of the unc-26 mutant revealed defects in multiple steps of synaptic vesicle recycling. Specifically, we observed defects in the recruitment of endocytic machinery, the fission of vesicles from the plasma membrane, the uncoating of vesicles after fission from the membrane, the recovery of vesicles from endosomes, and the tethering of synaptic vesicles to the cytoskeleton in the reserve pool. In contrast to the pleiotropic defects observed at the synapses of unc-26 mutants, mouse synaptojanin 1 mutants exhibited only an accumulation of coated vesicles at nerve terminals (Cremona et al. 1999). Why do unc-26 mutants exhibit a larger variety of defects than the mouse mutant? One explanation is that functional redundancy in the mouse rescues some phenotypes. unc-26 represents the only synaptojanin-like molecule encoded by the C. elegans genome, whereas the mouse genome encodes at least one other synaptojanin-like molecule (Khvotchev and Sudhof 1998). This gene may provide functional redundancy with synaptojanin 1; however, such redundancy can only be partial since synaptojanin 1 mutants are inviable.
How might the known catalytic properties of synaptojanin explain the pleiotropic defects we observed in the synaptic vesicle recycling pathway? Synaptojanin may alter the structural properties of the membrane, or alter the binding properties of the membrane. First, synaptojanin may affect the structural properties of the membrane. During vesicle formation, tight curvature of the membrane at the neck of the bud must be achieved. The phosphatase activity of synaptojanin may facilitate membrane curvature by removing negative charges from the inner membrane surface, thereby relieving the inhibition of lipid-packing caused by repulsion between charged lipids. This model is similar to a mechanism proposed for endophilin, a lysophosphatidic acid acyl transferase. Specifically, endophilin converts inverted cone-shaped lipids to cone-shaped lipids, which favors the negative membrane curvature required for bud formation (Schmidt et al. 1999).
Alternatively, there are a number of proteins implicated in endocytosis that bind polyphosphoinositides. Specifically, synaptotagmin, which is implicated in the recruitment of the clathrin adaptor complex to the plasma membrane (Zhang et al. 1994; Jorgensen et al. 1995), dynamin, which is required for fission of the vesicles (Schmid et al. 1998), and the clathrin adaptor complex, which coats the vesicle (Cremona and De Camilli 1997), all bind PIs (Schiavo et al. 1996; Zheng et al. 1996; Hao et al. 1997; Jost et al. 1998; Gaidarov and Keen 1999). Since endocytosis is stalled at each of these steps in the synaptojanin mutant, it is conceivable that cleavage of phosphates from phospholipids is required to release these proteins from the membrane, which allows the next step in the endocytic pathway to proceed.
Finally, the defects we observed in unc-26 mutants are not consistent with a block at any one of these steps, but are most consistent with an overall kinetic slowing in the synaptic vesicle recycling pathway. Support for this hypothesis is provided first by the variety of defects seen along multiple steps of the pathway, and second, by the continued presence of vesicles, the end product of endocytosis, at synapses. Synaptojanin, therefore, is not essential for synaptic vesicle recycling per se, but more likely accelerates the progress of intermediates along multiple steps of the synaptic vesicle recycling pathway.
| Acknowledgments |
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T.W. Harris was in part supported by a National Institutes of Health (NIH) Genetics Training Grant Fellowship. H.R. Horvitz is an Investigator of the Howard Hughes Medical Institute. This research was supported by grants from the Huntsman Cancer Institute and NIH grant RO1 NS 34307 to E.M. Jorgensen, and NIH grant GM29663 to H.R. Horvitz.
Abbreviations used in this paper: Ce-synaptojanin, Caenorhabditis elegans synaptojanin; EST, expressed sequence tag; GABA,
-aminobutyric acid; GFP, green fluorescent protein; ORF, open reading frame; PI, phosphoinositide.
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